ERP 9 min read

Shopify ERP Integration: Connect Your Store to Enterprise Systems (2025)

Guide to integrating Shopify with ERP systems like NetSuite, SAP, Microsoft Dynamics, and more. Compare solutions, costs, and implementation approaches.

Growing Shopify stores eventually need systems that go beyond basic accounting integration. ERP (Enterprise Resource Planning) systems centralize inventory, orders, manufacturing, purchasing, and financials into one source of truth.

Shopify
integrates with
NetSuite
ERP 4.2
TOP PICK

NetSuite ERP Connector

ERP Integration for Shopify
4.2
7 reviews
Price
$199.92/month
Last Updated
2025-12-19

2025 Snapshot

Data pointValue
NetSuite connector rating3.9/5 (8 reviews, checked Dec 2025)
SAP Business One connector rating4.4/5 (44 reviews, checked Dec 2025)
Example connector pricingNetSuite: free to install; SAP: from $35/month (checked Dec 2025)
Common approachPre-built connector → iPaaS → custom API

Ratings and pricing change over time, so treat these as a directional snapshot while evaluating vendors and integration approaches.

When Do You Need Shopify ERP Integration?

ERP integration makes sense when:

SignalThresholdImpact
Order volume1,000+/monthManual processes break down
SKU count500+ productsInventory complexity increases
Warehouses2+ locationsNeed unified inventory view
Channels3+ sales channelsReconciliation becomes nightmare
B2B sales>20% of revenueNeed wholesale/credit terms
Revenue$1M+ annuallyCost of errors justifies investment

Warning signs you need ERP:

  • Overselling due to inventory sync delays
  • Hours spent reconciling between systems
  • Customer service lacks order visibility
  • Month-end close takes weeks, not days

ERP Systems Compatible with Shopify

Tier 1: Enterprise (Large companies, $10M+ revenue)

ERPShopify CompatibilityBest ForStarting Cost
NetSuiteExcellent (many connectors)Retail, ecommerce native$12,000/year
SAP Business OneGood (via middleware)Manufacturing$3,200/user/year
Microsoft Dynamics 365GoodB2B commerce$70/user/month
Sage IntacctModerateFinancial managementCustom quote

Tier 2: Mid-Market (Growing companies, $1-10M revenue)

ERPShopify CompatibilityBest ForStarting Cost
AcumaticaGoodMulti-warehouse$1,000/month
BrightpearlExcellent (purpose-built)Retail/wholesale$375/month
Cin7ExcellentInventory-focused$349/month
Zoho InventoryGoodBudget-conscious$79/month

Tier 3: Small Business

ERPShopify CompatibilityBest ForStarting Cost
OdooGoodAll-in-oneFree - $25/user/month
ERPNextModerateOpen sourceSelf-hosted free
TradeGeckoExcellentNow QuickBooks Commerce$39/month

Integration Approaches

Option 1: Pre-Built Connectors

Fastest implementation, limited customization.

Examples:

  • Celigo Shopify-NetSuite Connector: $695/month, pre-configured flows
  • Breadwinner for Dynamics: $49/month/store
  • Stock Sync for Cin7: Built-in integration

Best for: Standard use cases, quick deployment

Option 2: iPaaS (Integration Platform as a Service)

Flexible, handles complex requirements.

PlatformShopify SupportStarting PriceBest For
CeligoNative connector$600/monthNetSuite users
WorkatoStrong$10,000/yearEnterprise
BoomiStrongCustomComplex needs
ZapierGood$20/monthSimple workflows
MakeGood$9/monthBudget option

Best for: Multi-system integrations, custom logic requirements

Option 3: Custom API Development

Maximum flexibility, highest cost.

// Example: Shopify to ERP order sync (simplified)
const syncOrderToERP = async (shopifyOrder) => {
  const erpOrder = {
    externalId: shopifyOrder.id,
    customer: await mapCustomer(shopifyOrder.customer),
    lines: shopifyOrder.line_items.map(item => ({
      sku: item.sku,
      quantity: item.quantity,
      price: item.price
    })),
    shipping: shopifyOrder.shipping_lines[0]?.price || 0,
    tax: shopifyOrder.total_tax
  };

  return await erpClient.createSalesOrder(erpOrder);
};

Best for: Unique business processes, maximum control

NetSuite is the most common ERP choice for Shopify stores. Here’s why and how to integrate.

Why NetSuite for Shopify?

  • Purpose-built for retail/ecommerce
  • Strong inventory and warehouse management
  • Multi-subsidiary and multi-currency support
  • Large ecosystem of connectors and partners

Integration Options

MethodCostComplexityBest For
Celigo Connector$695-2,500/moLowMost stores
FarApp$400-800/moLow-MediumSimple needs
Custom SuiteScript$20K-100K+HighUnique requirements
Shopify Plus FlowIncludedMediumShopify Plus customers

Key Data Flows

Data Flow
%%{init: {'theme': 'base', 'themeVariables': { 'primaryColor': '#e0f2fe', 'primaryTextColor': '#0369a1', 'primaryBorderColor': '#0369a1', 'lineColor': '#64748b', 'secondaryColor': '#f0fdf4', 'tertiaryColor': '#fef3c7'}}}%% graph LR A[Shopify Store] -->|Orders| B[Shopify] B -->|Inventory Levels| C[NetSuite] C -->|Stock Updates| B B -->|Availability| A C -->|Purchase Orders| D[Suppliers]
Real-time sync Scheduled sync
Shopify → NetSuite:
├── Orders → Sales Orders
├── Customers → Customer Records
├── Refunds → Credit Memos
└── Gift Cards → Liability Entries

NetSuite → Shopify:
├── Inventory Levels → Stock Updates
├── Product Data → Product Sync
├── Pricing → Price Lists
└── Fulfillment → Tracking Numbers

Implementation Timeline

PhaseDurationActivities
Discovery2-4 weeksRequirements, mapping, design
Configuration3-6 weeksConnector setup, field mapping
Testing2-4 weeksUAT, error handling
Go-live1 weekCutover, monitoring
Total8-15 weeks

Integration Architecture Best Practices

Real-Time vs. Batch Sync

Sync TypeUse ForProsCons
Real-timeOrders, inventoryImmediate updatesHigher complexity, cost
BatchProducts, pricingSimpler, cheaperDelayed updates
HybridMost implementationsBalance of bothRequires more planning

Recommended approach:

  • Real-time: Order creation, inventory updates
  • Batch (every 15-60 min): Product sync, pricing
  • Batch (daily): Financial summaries, reporting data

Error Handling Framework

Integration Error Handling:
1. Retry Logic
   └── Automatic retry (3 attempts, exponential backoff)

2. Dead Letter Queue
   └── Failed transactions stored for manual review

3. Alerting
   └── Email/Slack notification on critical failures

4. Reconciliation Reports
   └── Daily comparison: Shopify orders vs ERP orders

Data Mapping Considerations

Shopify FieldERP Mapping Notes
Order IDUnique external reference
Customer emailMatch or create customer
SKUMust match exactly (or map)
TaxMay need jurisdiction mapping
Discount codesMap to promotion/pricing rules
Shipping methodMap to carrier/service

Cost Analysis

One-Time Implementation Costs

ComplexityiPaaS ConnectorCustom Build
Simple (basic sync)$5,000-15,000$15,000-30,000
Medium (custom logic)$15,000-30,000$30,000-60,000
Complex (multi-system)$30,000-75,000$60,000-150,000

Ongoing Costs

ComponentMonthly Range
iPaaS/Connector license$500-3,000
ERP license$500-5,000
Support/maintenance$500-2,000
Total$1,500-10,000/month

ROI Calculation

Monthly savings from ERP integration:
├── Labor reduction: 40+ hrs/month × $30/hr = $1,200
├── Inventory accuracy: Reduce stockouts 50% = $2,000+
├── Faster month-end: Save 20 hrs × $50/hr = $1,000
├── Reduced errors: Fewer chargebacks = $500
└── Total savings: ~$4,700/month

Typical payback period: 6-12 months

Implementation Checklist

Pre-Implementation

  • Document current workflows and pain points
  • Define success metrics (order accuracy, sync time, etc.)
  • Clean up Shopify product data (SKUs, variants)
  • Set up ERP sandbox environment
  • Identify integration champion/project owner

Configuration

  • Map Shopify fields to ERP fields
  • Configure tax jurisdiction mapping
  • Set up customer matching rules
  • Define inventory sync logic (ATP, safety stock)
  • Configure error handling and notifications

Testing

  • Test each integration flow independently
  • Run parallel processing (old + new system)
  • Validate financial reconciliation
  • Load test for peak volume
  • Document edge cases and handling

Go-Live

  • Establish cutover date and freeze
  • Migrate historical data if needed
  • Enable production integration
  • Monitor closely for 2-4 weeks
  • Conduct post-implementation review

Common Pitfalls to Avoid

1. Underestimating Data Cleanup

Problem: Dirty product data causes sync failures

Solution: Before integration:

  • Standardize SKUs across systems
  • Clean up duplicate customers
  • Validate product hierarchies

2. Over-Engineering Initial Implementation

Problem: Trying to automate everything at once

Solution: Start with core flows:

  1. Order sync (Shopify → ERP)
  2. Inventory sync (ERP → Shopify)
  3. Add complexity incrementally

3. Ignoring Exception Handling

Problem: Edge cases cause downstream problems

Solution: Plan for:

  • Split shipments
  • Partial refunds
  • Back-ordered items
  • International addresses
  • Tax exemptions

Next Steps

Ready to integrate your Shopify store with ERP?

  1. Assess your needs - Document current pain points and requirements
  2. Evaluate ERP options - Request demos from 2-3 vendors
  3. Choose integration approach - iPaaS vs. custom based on complexity
  4. Plan implementation - Budget 3-6 months for proper rollout

Shopify + NetSuite implementation checklist (2025)

This section adds practical “make it stable” steps you can use after you install the app/connector. It’s intentionally lightweight: the goal is fewer sync surprises, cleaner reporting, and easier troubleshooting.

1) Quick setup checklist

  • Permissions first: grant only the scopes you need (orders/customers/products as required) and document who owns the admin credentials.
  • Data mapping: confirm how email, phone, currency, and SKU are mapped between Shopify and NetSuite.
  • Historical import: decide how far back to import orders/customers (avoid importing years of data if you don’t need it).
  • Deduplication rules: pick one unique identifier per object (usually email for customers, order ID for orders) to prevent doubles.
  • Alerts: set a lightweight alert path (email/Slack) for failed syncs, auth expiry, and API rate limits.

2) Data you should verify after connecting

Most integration issues show up in the first hour if you test the right things. Use the table below as a QA checklist (create a test order if needed).

Data objectWhat to checkWhy it matters
CustomersEmail/phone format, marketing consent fields, duplicatesPrevents double messaging and broken segmentation
OrdersOrder total, tax, discount, shipping, currencyKeeps revenue reporting and automation triggers accurate
Line itemsSKU, variant ID, quantity, refunds/returns behaviorAvoids inventory and attribution mismatches
FulfillmentStatus changes + timestamps, tracking numbers, carrier fieldsDrives customer notifications and post-purchase flows
CatalogProduct titles, handles, images, collections/tagsEnsures personalization and reporting match your storefront

3) Automation ideas for ERP

  • Inventory sync: keep on-hand and available quantities consistent between NetSuite and your store.
  • Multi-warehouse: define fulfillment priority rules to avoid overselling across locations.
  • PO workflow: connect demand signals (sales velocity) to purchasing so replenishment is predictable.
  • SKU governance: lock naming conventions early to prevent mapping debt as you scale.
  • Order routing: separate B2B vs DTC flows so taxes, terms, and invoices remain clean.

API sanity check (Shopify Admin API)

If your integration UI says “connected” but data isn’t flowing, a quick API call helps confirm whether the store is accessible and returning the objects you expect.

# List the 5 most recent orders (GraphQL)
curl -X POST "https://your-store.myshopify.com/admin/api/2025-01/graphql.json" \
  -H "X-Shopify-Access-Token: $SHOPIFY_ADMIN_TOKEN" \
  -H "Content-Type: application/json" \
  -d "{\"query\":\"{ orders(first: 5, sortKey: CREATED_AT, reverse: true) { edges { node { id name createdAt totalPriceSet { shopMoney { amount currencyCode } } customer { email } } } } }\"}"

Tip: keep tokens/keys in environment variables, and test in a staging store/site before rolling changes to production.

4) KPIs to monitor (so you catch problems early)

  • Sync freshness: how long it takes for a new order/customer event to appear in NetSuite.
  • Error rate: failed syncs per day (and which object types fail most).
  • Duplicates: number of merged/duplicate contacts or orders created by mapping mistakes.
  • Revenue parity: weekly spot-check that Shopify totals match downstream reporting (especially after refunds).
  • Attribution sanity: confirm that key events (purchase, refund, subscription) are tracked consistently.

5) A simple 30-day optimization plan

  1. Week 1: connect + map fields, then validate with 5–10 real orders/customers.
  2. Week 2: enable 1–2 automations and measure baseline KPIs (conversion, AOV, repeat rate).
  3. Week 3: tighten segmentation/rules (exclude recent buyers, add VIP thresholds, handle edge cases).
  4. Week 4: document the setup, create an “owner” checklist, and set a recurring monthly audit.

Related integration guides

Sources


Need simpler integrations first? Start with our Shopify QuickBooks integration or Shopify Xero integration guides.

ERP Integration Comparison

Compare key features across popular erp solutions

FeatureNetSuiteSAP Business OneSkubanaStocky
Inventory syncStock level synchronizationReal-timeScheduledReal-timeReal-time
Multi-warehouseMultiple location supportYesYesYesYes
Purchase ordersPO managementYesYesYesYes
Order routingFulfillment automationYesYesAdvancedBasic
Financial postingGL journal entriesYesYesVia integrationNo
ImplementationSetup complexityComplexComplexMediumEasy

Data based on publicly available information as of February 2026. Features and pricing may vary.

Questions & Answers

Does Shopify integrate with ERP systems?

Shopify doesn't have native ERP integrations. You'll need middleware (like Celigo or Workato), a custom API integration, or an ERP vendor's Shopify connector. Shopify Plus offers some pre-built enterprise connectors.

How much does Shopify ERP integration cost?

Costs vary widely: simple connectors start at $500/month, iPaaS solutions run $1,000-5,000/month, and custom implementations can cost $20,000-100,000+ for initial setup plus ongoing maintenance.

Which ERP is best for Shopify stores?

NetSuite is most commonly used with Shopify due to strong retail features and available connectors. For smaller operations, Odoo or Zoho are cost-effective. Microsoft Dynamics and SAP suit larger enterprises.

When should a Shopify store implement ERP?

Consider ERP when you're processing 1,000+ orders/month, managing multiple warehouses, have complex manufacturing or B2B operations, or spending more than 20 hours/week on manual data management.